Basic Information
Locus ID:
Sgl48095
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 14199654 | 14202079 | - | Sgl48095 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.69 | 73,654.04 Da | 35.09 | 92.12 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06222 | RNase_H_like | 487 | 605 | 1.64556E-21 | IPR044730 |
| Pfam | PF13456 | Reverse transcriptase-like | 487 | 607 | 7.3E-17 | IPR002156 |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 10 | 194 | 1.7E-25 | IPR000477 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 485 | 609 | 3.41E-11 | IPR012337 |
| Gene3D | G3DSA:3.30.420.10 | - | 484 | 611 | 2.2E-11 | IPR036397 |
| ProSiteProfiles | PS50879 | RNase H domain profile. | 504 | 609 | 9.36881 | IPR002156 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 1 | 195 | 9.880068 | IPR000477 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021835469.1 | uncharacterized protein LOC110775174 [Spinacia oleracea] | 0 |
| P92555 | Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1 | 0 | |
| TrEMBL | A0A2N9EI74 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2141 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||