Basic Information
Locus ID:
Sgl47994
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
SNF1-related protein kinase catalytic subunit alpha
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 13101821 | 13102400 | + | Sgl47994 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.35 | 8,514.90 Da | 57.47 | 98.68 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 3 | 66 | 6.5E-16 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 66 | 1.07E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 68 | 1.5E-20 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 68 | 13.85628 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29160.3 | SNF1 kinase homolog 11. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. | 0 |
| RefSeq | XP_026404746.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like [Papaver somniferum] | 0 |
| Q38997 | SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=3 | 0 | |
| TrEMBL | Q8S9G0 | SNF1-related protein kinase (Fragment) OS=Triticum aestivum OX=4565 GN=snRK1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah005482 |
| Amaranthaceae | Suaeda glauca | 3 | Sgl47994, Sgl53349, Sgl58611 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.4AG0005760 |
| Asparagaceae | Asparagus officinalis | 3 | AsparagusV1_01.1023.V1.1, AsparagusV1_01.2635.V1.1 ... |
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0683_0010.v2.2 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00011914 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0320830.1 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr06G016290 |
| Poaceae | Triticum dicoccoides | 1 | gene_TRIDC3BG078850 |
| Poaceae | Zea mays | 1 | Zm00001eb107770_P001 |
| Poaceae | Zoysia japonica | 3 | nbis-gene-13837, nbis-gene-269, nbis-gene-36809 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-4878 |
| Salicaceae | Populus euphratica | 1 | populus_peu09382 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC114076934 |