Basic Information
Locus ID:
Sgl47944
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 12389061 | 12391840 | - | Sgl47944 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.48 | 22,583.96 Da | 22.26 | 94.21 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 6 | 83 | 1.3E-13 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 11 | 85 | 1.02E-17 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 4 | 106 | 1.2E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 163 | 13.601869 | IPR000719 |
| Coils | Coil | Coil | 194 | 209 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04700.1 | PB1 domain-containing protein tyrosine kinase. | 0 |
| RefSeq | XP_016452155.1 | PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana tabacum] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A453JT84 | Protein kinase domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 11 | Sgl18095, Sgl43118, Sgl47944, Sgl54011, Sgl59343, Sgl65393 ... |
| Brassicaceae | Brassica nigra | 1 | BniB06g041570.2N |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate01g06040 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_10_RagTag.245 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-16698 |