Basic Information
Locus ID:
Sgl47429
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
high mobility group
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 8099207 | 8101841 | - | Sgl47429 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.52 | 26,156.59 Da | 27.76 | 87.69 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01388 | ARID/BRIGHT DNA binding domain | 59 | 137 | 7.1E-10 | IPR001606 |
| SUPERFAMILY | SSF46774 | ARID-like | 59 | 141 | 3.14E-14 | IPR036431 |
| Gene3D | G3DSA:1.10.150.60 | - | 52 | 146 | 2.8E-15 | IPR036431 |
| SMART | SM01014 | ARID_2 | 41 | 137 | 3.0E-5 | - |
| SMART | SM00501 | bright_3 | 45 | 142 | 0.0059 | IPR001606 |
| ProSiteProfiles | PS51011 | ARID domain profile. | 1 | 141 | 14.917648 | IPR001606 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 167 | 187 | - | - |
| Coils | Coil | Coil | 53 | 53 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G04880.1 | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain. | 0 |
| RefSeq | XP_021837956.1 | high mobility group B protein 15-like isoform X2 [Spinacia oleracea] | 0 |
| Q9MAT6 | High mobility group B protein 15 OS=Arabidopsis thaliana OX=3702 GN=HMGB15 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RKE8 | High mobility group B protein 15-like OS=Spinacia oleracea OX=3562 GN=SOVF_061930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology