Basic Information
Locus ID:
Sgl47427
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 8070480 | 8082415 | - | Sgl47427 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.55 | 195,524.52 Da | 47.10 | 77.91 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 353 | 625 | 8.8527E-135 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1464 | 1727 | 5.08783E-147 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 375 | 614 | 4.3E-31 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1670 | 1725 | 3.6E-7 | IPR002498 |
| Pfam | PF01363 | FYVE zinc finger | 30 | 96 | 2.7E-17 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1503 | 1669 | 1.4E-32 | IPR002498 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 29 | 97 | 5.28E-18 | IPR011011 |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 419 | 591 | 1.75E-42 | IPR027409 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1445 | 1727 | 2.81E-80 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1441 | 1584 | 1.5E-36 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 1586 | 1728 | 6.7E-42 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 21 | 110 | 6.9E-21 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 418 | 591 | 8.0E-54 | IPR027409 |
| SMART | SM00330 | PIPK_2 | 1437 | 1728 | 7.9E-125 | IPR002498 |
| SMART | SM00064 | fyve_4 | 25 | 98 | 1.4E-19 | IPR000306 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 33 | 97 | 13.008968 | IPR017455 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1408 | 1727 | 57.400032 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1169 | 1195 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1738 | 1758 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1173 | 1189 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1248 | 1272 | - | - |
| Coils | Coil | Coil | 1061 | 1092 | - | - |
| Coils | Coil | Coil | 1017 | 1037 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010687592.2 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MFB0 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology