Basic Information
Locus ID:
Sgl46405
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Zinc finger, C3HC4 type (RING finger)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB5 | 262110 | 263463 | + | Sgl46405 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 28,062.84 Da | 72.72 | 70.93 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16449 | RING-HC | 209 | 246 | 1.84996E-8 | - |
| Pfam | PF13920 | Zinc finger, C3HC4 type (RING finger) | 207 | 251 | 7.1E-11 | - |
| SUPERFAMILY | SSF57850 | RING/U-box | 204 | 253 | 1.1E-13 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 205 | 256 | 3.5E-12 | IPR013083 |
| SMART | SM00184 | ring_2 | 209 | 246 | 7.2E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 209 | 247 | 10.586141 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 199 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 98 | 128 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 178 | 192 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G03965.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_010686766.2 | uncharacterized protein LOC104900931 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A834ZZC7 | RING-type domain-containing protein OS=Tetracentron sinense OX=13715 GN=HHK36_002157 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology