Basic Information
Locus ID:
Sgl46363
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 60125746 | 60129056 | + | Sgl46363 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 62,135.06 Da | 40.88 | 87.03 | -0.31 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 10 | 49 | 1.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 91 | 3.14E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 62 | 6.7E-6 | - |
| SMART | SM00256 | fbox_2 | 14 | 54 | 7.7E-6 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 112 | 336 | 2.2E-25 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 53 | 10.000863 | IPR001810 |
| Coils | Coil | Coil | 426 | 446 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23880.1 | F-box and associated interaction domains-containing protein. | 0 |
| RefSeq | XP_021764840.1 | F-box/kelch-repeat protein At3g23880-like, partial [Chenopodium quinoa] | 0 |
| Q9LIR8 | F-box/kelch-repeat protein At3g23880 OS=Arabidopsis thaliana OX=3702 GN=At3g23880 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5B7ABY1 | F-box domain-containing protein (Fragment) OS=Davidia involucrata OX=16924 GN=Din_022839 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 3 | Sgl46363, Sgl46369, Sgl51076 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.5AG0024080 |