Basic Information
Locus ID:
Sgl46333
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 59904134 | 59909401 | + | Sgl46333 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.04 | 57,245.29 Da | 33.82 | 89.33 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 379 | 450 | 3.0E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 42 | 361 | 5.5E-76 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 42 | 361 | 3.51E-81 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 41 | 366 | 2.2E-108 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 372 | 485 | 3.2E-11 | - |
| SMART | SM00768 | X8_cls | 378 | 463 | 5.7E-47 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 276 | 289 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_010686818.1 | glucan endo-1,3-beta-glucosidase 1 [Beta vulgaris subsp. vulgaris] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A803M1V2 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology