Basic Information
Locus ID:
Sgl46196
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 58939114 | 58941884 | + | Sgl46196 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 60,613.06 Da | 42.49 | 84.59 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 166 | 259 | 5.0E-9 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 369 | 525 | 5.4E-35 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 36 | 137 | 3.5E-20 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 351 | 520 | 2.7E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 140 | 8.2E-25 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 326 | 441 | 3.9E-36 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 151 | 262 | 2.4E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 442 | 532 | 2.0E-25 | - |
| SMART | SM00220 | serkin_6 | 366 | 535 | 1.1E-9 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 149 | 262 | 16.344017 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 28 | 140 | 18.960073 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 366 | 538 | 31.198698 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 372 | 394 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 486 | 498 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 295 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021719623.1 | cysteine-rich receptor-like protein kinase 5 isoform X1 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7N2LTL9 | Cysteine-rich receptor-like protein kinase 10 OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 4 | Sgl46172, Sgl46196, Sgl50868, Sgl50874 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0002610 |