Basic Information
Locus ID:
Sgl46173
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 58797474 | 58811654 | - | Sgl46173 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.52 | 236,486.70 Da | 40.07 | 84.33 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01650 | RT_nLTR_like | 1201 | 1448 | 6.4472E-59 | - |
| CDD | cd14066 | STKc_IRAK | 1798 | 2064 | 2.64126E-92 | - |
| Pfam | PF00078 | Reverse transcriptase (RNA-dependent DNA polymerase) | 1207 | 1437 | 9.1E-48 | IPR000477 |
| Pfam | PF01657 | Salt stress response/antifungal | 1605 | 1695 | 3.3E-13 | IPR002902 |
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 95 | 234 | 2.7E-27 | IPR025558 |
| Pfam | PF01657 | Salt stress response/antifungal | 1492 | 1584 | 6.0E-20 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1795 | 2063 | 4.3E-47 | IPR001245 |
| SUPERFAMILY | SSF56219 | DNase I-like | 718 | 948 | 7.59E-28 | IPR036691 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1777 | 2066 | 4.72E-79 | IPR011009 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 1159 | 1436 | 3.11E-21 | IPR043502 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1868 | 2073 | 4.4E-57 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 1596 | 1698 | 3.2E-22 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1752 | 1867 | 9.5E-39 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 1481 | 1586 | 1.6E-21 | IPR038408 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 715 | 949 | 1.3E-30 | IPR036691 |
| SMART | SM00220 | serkin_6 | 1792 | 2056 | 8.3E-27 | IPR000719 |
| ProSiteProfiles | PS50878 | Reverse transcriptase (RT) catalytic domain profile. | 1188 | 1466 | 16.296255 | IPR000477 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1593 | 1698 | 17.38501 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1480 | 1587 | 18.172541 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1792 | 2114 | 36.315205 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1913 | 1925 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1798 | 1820 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 47 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_019106728.2 | cysteine-rich receptor-like protein kinase 10 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8W4G6 | Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 | 0 | |
| TrEMBL | A0A803NCS0 | Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||