Basic Information
Locus ID:
Sgl46171
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 58789336 | 58792661 | + | Sgl46171 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.63 | 67,151.57 Da | 38.12 | 78.89 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 352 | 414 | 2.2E-9 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 163 | 260 | 2.9E-10 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 33 | 134 | 2.4E-16 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 416 | 548 | 1.2E-14 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 334 | 572 | 1.27E-46 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 28 | 137 | 2.6E-20 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 151 | 263 | 1.0E-19 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 416 | 559 | 3.5E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 311 | 415 | 3.4E-30 | - |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 156 | 263 | 16.651789 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 258 | 553 | 13.983486 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 26 | 137 | 18.091072 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 356 | 378 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_030968422.1 | cysteine-rich receptor-like protein kinase 10 [Quercus lobata] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A7N2N550 | Cysteine-rich receptor-like protein kinase 25 OS=Quercus lobata OX=97700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017174 |
| Amaranthaceae | Suaeda glauca | 4 | Sgl46171, Sgl46195, Sgl50867, Sgl50873 |