halophFGD

Basic Information

Locus ID: Sgl46149

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: Cysteine-rich receptor-like protein kinase

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrA5	58616666	58619762	-	Sgl46149

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.50	63,182.44 Da	43.10	98.00	-0.12

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00118	LysM	209	251	7.10378E-6	IPR018392
Pfam	PF01476	LysM domain	209	252	1.2E-8	IPR018392
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	335	419	1.4E-15	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	318	545	3.28E-40	IPR011009
SUPERFAMILY	SSF54106	LysM domain	206	252	9.02E-6	IPR036779
Gene3D	G3DSA:3.10.350.10	LysM domain	206	261	1.2E-8	IPR036779
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	409	520	7.7E-19	-
Gene3D	G3DSA:3.30.200.20	Phosphorylase Kinase; domain 1	295	408	3.8E-38	-
SMART	SM00257	LysM_2	207	252	7.7E-5	IPR018392
ProSiteProfiles	PS51782	LysM domain profile.	206	251	11.970386	IPR018392
ProSiteProfiles	PS50011	Protein kinase domain profile.	333	564	12.146067	IPR000719
ProSitePatterns	PS00107	Protein kinases ATP-binding region signature.	339	361	-	IPR017441

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT2G23770.1	protein kinase family protein / peptidoglycan-binding LysM domain-containing protein.
RefSeq	XP_048490229.1	cysteine-rich receptor-like protein kinase 10 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	O64825	LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1
TrEMBL	A0A7N2LPN0	Protein kinase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Suaeda glauca	2	Sgl46149, Sgl50848