Basic Information
Locus ID:
Sgl46001
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 57588036 | 57592048 | + | Sgl46001 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 112,304.70 Da | 36.23 | 95.70 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 1.3E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 145 | 203 | 1.0E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 692 | 976 | 4.7E-40 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 554 | 575 | 0.27 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 682 | 980 | 1.62E-71 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 71 | 374 | 1.49E-53 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 337 | 592 | 2.38E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 188 | 3.4E-41 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 529 | 612 | 1.7E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 526 | 4.9E-88 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 674 | 786 | 8.9E-22 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 787 | 998 | 3.9E-60 | - |
| SMART | SM00369 | LRR_typ_2 | 551 | 574 | 75.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 95 | 119 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 143 | 166 | 45.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 337 | 360 | 160.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 690 | 983 | 2.7E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 240 | 264 | 78.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 690 | 988 | 35.792248 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 831 | 843 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 696 | 719 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 243 | 256 | 5.3E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 551 | 564 | 5.3E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G28440.1 | HAESA-like 1. | 0 |
| RefSeq | XP_010686396.1 | receptor-like protein kinase HSL1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SGP2 | Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QY06 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_128600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology