Basic Information
Locus ID:
Sgl45373
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 52343822 | 52345333 | + | Sgl45373 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.36 | 59,248.96 Da | 54.25 | 96.42 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08387 | FBD | 397 | 444 | 1.5E-6 | IPR006566 |
| Pfam | PF00646 | F-box domain | 24 | 61 | 1.4E-7 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 182 | 372 | 2.08E-7 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 21 | 76 | 2.22E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 10 | 63 | 1.6E-8 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 98 | 385 | 9.1E-8 | IPR032675 |
| SMART | SM00579 | 9598neu4hmm | 402 | 486 | 3.2E-4 | IPR006566 |
| SMART | SM00256 | fbox_2 | 28 | 69 | 0.003 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 22 | 58 | 9.603447 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22670.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_021851257.1 | F-box/FBD/LRR-repeat protein At5g22660-like [Spinacia oleracea] | 0 |
| Q9FNJ4 | Putative F-box/FBD/LRR-repeat protein At5g22670 OS=Arabidopsis thaliana OX=3702 GN=At5g22670 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0K9RDR7 | FBD domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||