Basic Information
Locus ID:
Sgl45372
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
FBD-associated F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 52333362 | 52334858 | - | Sgl45372 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.34 | 58,726.38 Da | 50.81 | 97.01 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08387 | FBD | 392 | 439 | 2.9E-6 | IPR006566 |
| Pfam | PF00646 | F-box domain | 19 | 56 | 5.3E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 9 | 71 | 2.88E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 177 | 367 | 1.41E-7 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 58 | 2.3E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 86 | 380 | 1.2E-8 | IPR032675 |
| SMART | SM00579 | 9598neu4hmm | 397 | 481 | 9.0E-4 | IPR006566 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 53 | 9.391492 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G22670.1 | F-box/RNI-like/FBD-like domains-containing protein. | 0 |
| RefSeq | XP_021851257.1 | F-box/FBD/LRR-repeat protein At5g22660-like [Spinacia oleracea] | 0 |
| Q9FNJ4 | Putative F-box/FBD/LRR-repeat protein At5g22670 OS=Arabidopsis thaliana OX=3702 GN=At5g22670 PE=4 SV=1 | 0 | |
| TrEMBL | A0A0K9RDR7 | FBD domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_084200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||