Basic Information
Locus ID:
Sgl45369
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
FBD-associated F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 52310639 | 52312114 | - | Sgl45369 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.61 | 57,430.28 Da | 47.80 | 100.77 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 19 | 57 | 2.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 17 | 65 | 4.71E-11 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 91 | 361 | 1.1E-10 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 5 | 58 | 2.2E-7 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 76 | 437 | 1.0E-10 | IPR032675 |
| SMART | SM00579 | 9598neu4hmm | 390 | 474 | 2.4E-4 | IPR006566 |
| SMART | SM00256 | fbox_2 | 23 | 64 | 0.0098 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 17 | 64 | 9.523964 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G58860.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021851257.1 | F-box/FBD/LRR-repeat protein At5g22660-like [Spinacia oleracea] | 0 |
| Q9LXR6 | Putative F-box protein At3g58860 OS=Arabidopsis thaliana OX=3702 GN=At3g58860 PE=4 SV=1 | 0 | |
| TrEMBL | A0A803N0E2 | FBD domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||