Basic Information
Locus ID:
Sgl44948
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
CCR4-associated factor 1 homolog
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 46487393 | 46488420 | - | Sgl44948 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.67 | 17,551.16 Da | 35.10 | 94.29 | 0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 41 | 145 | 2.66E-27 | IPR012337 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2 | 48 | 4.01E-11 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 36 | 6.1E-9 | - |
| Gene3D | G3DSA:3.30.420.10 | - | 38 | 147 | 1.7E-30 | IPR036397 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 154 | 8.654968 | IPR000719 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G10960.1 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein. | 0 |
| RefSeq | XP_021857067.1 | probable CCR4-associated factor 1 homolog 7 [Spinacia oleracea] | 0 |
| Q9LEU4 | Probable CCR4-associated factor 1 homolog 10 OS=Arabidopsis thaliana OX=3702 GN=CAF1-10 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RG22 | poly(A)-specific ribonuclease OS=Spinacia oleracea OX=3562 GN=SOVF_075480 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||