Basic Information
Locus ID:
Sgl44807
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
DNA RNA polymerases superfamily protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 43931048 | 43940431 | + | Sgl44807 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 42,913.11 Da | 39.72 | 85.03 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03732 | Retrotransposon gag protein | 272 | 346 | 2.0E-8 | IPR005162 |
| Pfam | PF17919 | RNase H-like domain found in reverse transcriptase | 18 | 87 | 7.9E-9 | IPR041577 |
| SUPERFAMILY | SSF56672 | DNA/RNA polymerases | 2 | 87 | 8.75E-11 | IPR043502 |
| Gene3D | G3DSA:3.30.70.270 | - | 1 | 46 | 1.6E-6 | IPR043128 |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_021741331.1 | uncharacterized protein LOC110707612 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A0K9R0T8 | Ribonuclease H (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_119620 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||