Basic Information
Locus ID:
Sgl44530
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
DRM2
Description:
DNA (cytosine-5-)-methyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 37146690 | 37170138 | + | Sgl44530 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.15 | 113,644.45 Da | 45.08 | 84.93 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00145 | C-5 cytosine-specific DNA methylase | 883 | 999 | 2.5E-12 | IPR001525 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 882 | 1001 | 4.21E-17 | IPR029063 |
| SUPERFAMILY | SSF53098 | Ribonuclease H-like | 4 | 113 | 4.93E-21 | IPR012337 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 674 | 876 | 3.21E-23 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 647 | 752 | 6.7E-7 | - |
| Gene3D | G3DSA:3.30.420.10 | - | 1 | 165 | 1.3E-28 | IPR036397 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 843 | 1008 | 3.2E-28 | - |
| ProSiteProfiles | PS51679 | C-5 cytosine-specific DNA methylase (Dnmt) domain profile. | 883 | 1008 | 21.174997 | IPR001525 |
| ProSiteProfiles | PS50030 | Ubiquitin-associated domain (UBA) profile. | 566 | 608 | 8.570872 | IPR015940 |
| ProSiteProfiles | PS50994 | Integrase catalytic domain profile. | 1 | 119 | 12.436075 | IPR001584 |
| ProSiteProfiles | PS51680 | SAM-dependent methyltransferase DRM-type domain profile. | 678 | 1007 | 135.000687 | IPR030380 |
| Coils | Coil | Coil | 140 | 160 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G14620.1 | domains rearranged methyltransferase 2. A putative DNA methyltransferase with rearranged catalytic domains; similar to mammalian DNMT3 methyltransferases; contains UBA domains. The 3'-end proximal part of the gene coding region is highly methylated at both adenine and cytosine residues. | 0 |
| RefSeq | XP_021770937.1 | DNA (cytosine-5)-methyltransferase DRM2-like isoform X1 [Chenopodium quinoa] | 0 |
| Q9M548 | DNA (cytosine-5)-methyltransferase DRM2 OS=Arabidopsis thaliana OX=3702 GN=DRM2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LSI7 | SAM-dependent MTase DRM-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology