HalophFGD

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Basic Information
Locus ID: Sgl44520
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chrA5 36791473 36795797 + Sgl44520
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.25 46,426.18 Da 64.79 54.68 -1.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
MobiDBLite mobidb-lite consensus disorder prediction 129 203 - -
MobiDBLite mobidb-lite consensus disorder prediction 133 190 - -
Coils Coil Coil 119 139 - -
Coils Coil Coil 174 194 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_048503584.1 uncharacterized protein LOC125499103 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A0J8B250 Transposase (Fragment) OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_026120 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 1 Sbi_jg61541
Amaranthaceae Suaeda glauca 65 Sgl03681, Sgl04249, Sgl04994, Sgl04995, Sgl08792, Sgl09205 ...
Sgl09338, Sgl10181, Sgl13259, Sgl13963, Sgl14190, Sgl15384, Sgl19106, Sgl19340, Sgl20553, Sgl20747, Sgl21507, Sgl23134, Sgl23186, Sgl25409, Sgl25769, Sgl25933, Sgl26139, Sgl26827, Sgl28244, Sgl28400, Sgl28403, Sgl30591, Sgl30912, Sgl31560, Sgl31600, Sgl32400, Sgl36104, Sgl36910, Sgl37699, Sgl38011, Sgl41405, Sgl43651, Sgl44008, Sgl44357, Sgl44520, Sgl44552, Sgl48425, Sgl48777, Sgl49125, Sgl49285, Sgl49286, Sgl49315, Sgl52675, Sgl53085, Sgl53086, Sgl53444, Sgl53725, Sgl57966, Sgl58363, Sgl58364, Sgl58707, Sgl58985, Sgl64122, Sgl68577, Sgl72472, Sgl76026, Sgl77765, Sgl79036, Sgl81490
Amaranthaceae Chenopodium quinoa 1 CQ.Regalona.r1.1BG0009940
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.