Basic Information
Locus ID:
Sgl43201
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
SNF1-related protein kinase catalytic subunit alpha
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 13438886 | 13441160 | + | Sgl43201 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 36,653.83 Da | 43.21 | 94.54 | 0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd07033 | TPP_PYR_DXS_TK_like | 236 | 304 | 2.95252E-34 | - |
| Pfam | PF00069 | Protein kinase domain | 3 | 151 | 5.1E-56 | IPR000719 |
| Pfam | PF02779 | Transketolase, pyrimidine binding domain | 220 | 304 | 1.2E-18 | IPR005475 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 199 | 304 | 3.22E-29 | IPR029061 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 151 | 1.48E-61 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 153 | 5.3E-67 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 217 | 322 | 3.3E-27 | - |
| SMART | SM00220 | serkin_6 | 1 | 199 | 2.0E-40 | IPR000719 |
| SMART | SM00861 | Transket_pyr_3 | 217 | 324 | 0.0013 | IPR005475 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 246 | 36.668556 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 81 | 93 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G29160.3 | SNF1 kinase homolog 11. encodes a SNF1-related protein kinase that physically interacts with SCF subunit SKP1/ASK1 and 20S proteosome subunit PAD1. It has also been shown to interact with the WD protein PDL1. | 0 |
| RefSeq | XP_021767798.1 | SNF1-related protein kinase catalytic subunit alpha KIN10-like [Chenopodium quinoa] | 0 |
| Q38997 | SNF1-related protein kinase catalytic subunit alpha KIN10 OS=Arabidopsis thaliana OX=3702 GN=KIN10 PE=1 SV=3 | 0 | |
| TrEMBL | Q8S9G0 | SNF1-related protein kinase (Fragment) OS=Triticum aestivum OX=4565 GN=snRK1 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg30242 |
| Amaranthaceae | Suaeda glauca | 9 | Sgl04338, Sgl09407, Sgl27108, Sgl43201, Sgl47995, Sgl53505 ... |
| Poaceae | Thinopyrum elongatum | 1 | Tel1E01G627800 |
| Salicaceae | Populus euphratica | 1 | populus_peu12111 |