HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Sgl42890
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: belongs to the protein kinase superfamily
Maps and Mapping Data
Chromosome Start End Strand ID
chrA5 10159404 10165467 + Sgl42890
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.69 39,397.69 Da 42.27 90.37 -0.10
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
CDD cd06623 PKc_MAPKK_plant_like 69 335 2.52942E-139 -
Pfam PF00069 Protein kinase domain 73 331 1.9E-68 IPR000719
SUPERFAMILY SSF56112 Protein kinase-like (PK-like) 73 335 6.88E-80 IPR011009
Gene3D G3DSA:3.30.200.20 Phosphorylase Kinase; domain 1 59 150 4.3E-28 -
Gene3D G3DSA:1.10.510.10 Transferase(Phosphotransferase) domain 1 151 350 1.1E-60 -
SMART SM00220 serkin_6 71 331 2.8E-82 IPR000719
ProSiteProfiles PS50011 Protein kinase domain profile. 71 331 46.095932 IPR000719
ProSitePatterns PS00107 Protein kinases ATP-binding region signature. 77 100 - IPR017441
ProSitePatterns PS00108 Serine/Threonine protein kinases active-site signature. 189 201 - IPR008271
Gene Ontology
Biological Process:
GO:0006468 (protein phosphorylation)
Molecular Function:
GO:0004672 (protein kinase activity) GO:0005524 (ATP binding)
KEGG Pathway
KO Term:
K04368 (mitogen-activated protein kinase kinase 1 [EC:2.7.12.2])
Pathway:
ko01521 (EGFR tyrosine kinase inhibitor resistance) map01521 (EGFR tyrosine kinase inhibitor resistance) ko01522 (Endocrine resistance) map01522 (Endocrine resistance) ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) ko04012 (ErbB signaling pathway) map04012 (ErbB signaling pathway) ko04013 (MAPK signaling pathway - fly) map04013 (MAPK signaling pathway - fly) ko04014 (Ras signaling pathway) map04014 (Ras signaling pathway) ko04015 (Rap1 signaling pathway) map04015 (Rap1 signaling pathway) ko04022 (cGMP-PKG signaling pathway) map04022 (cGMP-PKG signaling pathway) ko04024 (cAMP signaling pathway) map04024 (cAMP signaling pathway) ko04062 (Chemokine signaling pathway) map04062 (Chemokine signaling pathway) ko04066 (HIF-1 signaling pathway) map04066 (HIF-1 signaling pathway) ko04068 (FoxO signaling pathway) map04068 (FoxO signaling pathway) ko04071 (Sphingolipid signaling pathway) map04071 (Sphingolipid signaling pathway) ko04072 (Phospholipase D signaling pathway) map04072 (Phospholipase D signaling pathway) ko04114 (Oocyte meiosis) map04114 (Oocyte meiosis) ko04140 (Autophagy - animal) map04140 (Autophagy - animal) ko04150 (mTOR signaling pathway) map04150 (mTOR signaling pathway) ko04151 (PI3K-Akt signaling pathway) map04151 (PI3K-Akt signaling pathway) map04210 (Apoptosis) ko04218 (Cellular senescence) map04218 (Cellular senescence) ko04320 (Dorso-ventral axis formation) map04320 (Dorso-ventral axis formation) ko04370 (VEGF signaling pathway) map04370 (VEGF signaling pathway) ko04371 (Apelin signaling pathway) map04371 (Apelin signaling pathway) ko04550 (Signaling pathways regulating pluripotency of stem cells) map04550 (Signaling pathways regulating pluripotency of stem cells) map04620 (Toll-like receptor signaling pathway) ko04626 (Plant-pathogen interaction) map04626 (Plant-pathogen interaction) map04650 (Natural killer cell mediated cytotoxicity) map04660 (T cell receptor signaling pathway) map04662 (B cell receptor signaling pathway) map04664 (Fc epsilon RI signaling pathway) map04666 (Fc gamma R-mediated phagocytosis) map04668 (TNF signaling pathway) ko04916 (Melanogenesis) map04916 (Melanogenesis)
Best hit
Source Best Hit ID Description E-value
TAIR AT4G29810.1 MAP kinase kinase 2. encodes a MAP kinase kinase 2 that regulates MPK6 and MPK4 in response to cold and salt stresses. Co-expression with MEKK1 in protoplasts activated MKK2 activity, suggesting that MEKK1 may be a regulator of MKK2. 0
RefSeq XP_010696552.1 mitogen-activated protein kinase kinase 2 [Beta vulgaris subsp. vulgaris] 0
Swiss-Prot A0A1S4CGX4 Mitogen-activated protein kinase kinase SIPKK OS=Nicotiana tabacum OX=4097 GN=SIPKK PE=1 SV=1 0
TrEMBL J7LJM3 Mitogen activated protein kinase kinase OS=Chenopodium album OX=3559 GN=mapkk2 PE=2 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Acanthaceae Avicennia marina 3 jg15466, jg31736, jg32898
Aizoaceae Mesembryanthemum crystallinum 3 gene_11012, gene_20263, gene_9128
Amaranthaceae Atriplex hortensis 2 Ah014671, Ah015217
Amaranthaceae Beta vulgaris 1 BVRB_8g197680
Amaranthaceae Salicornia bigelovii 4 Sbi_jg24606, Sbi_jg25090, Sbi_jg8465, Sbi_jg8935
Amaranthaceae Salicornia europaea 2 Seu_jg19661, Seu_jg20125
Amaranthaceae Suaeda aralocaspica 2 GOSA_00007709, GOSA_00014721
Amaranthaceae Suaeda glauca 5 Sgl42327, Sgl42365, Sgl42890, Sgl47105, Sgl47682
Amaranthaceae Chenopodium album 5 gene:ENSEOMG00000008912, gene:ENSEOMG00000032709 ...
gene:ENSEOMG00000035697, gene:ENSEOMG00000044913, gene:ENSEOMG00000047491
Amaranthaceae Chenopodium quinoa 4 CQ.Regalona.r1.8AG0015050, CQ.Regalona.r1.8AG0019160 ...
CQ.Regalona.r1.8BG0016360, CQ.Regalona.r1.8BG0023230
Anacardiaceae Pistacia vera 3 pistato.v30101160, pistato.v30257500, pistato.v30259710
Apiaceae Apium graveolens 2 Ag10G01498, Ag8G00267
Arecaceae Cocos nucifera 3 COCNU_06G004630, COCNU_14G003050, scaffold001333G000030
Arecaceae Phoenix dactylifera 3 gene-LOC103711214, gene-LOC103714344, gene-LOC103720812
Asparagaceae Asparagus officinalis 2 AsparagusV1_02.243.V1.1, AsparagusV1_06.835.V1.1
Asteraceae Flaveria trinervia 2 Ftri4G18858, Ftri8G12609
Brassicaceae Arabidopsis thaliana 3 AT4G26070.2, AT4G29810.2, AT5G56580.1
Brassicaceae Eutrema salsugineum 3 Thhalv10013956m.g.v1.0, Thhalv10025480m.g.v1.0 ...
Thhalv10025531m.g.v1.0
Brassicaceae Schrenkiella parvula 3 Sp6g18360.v2.2, Sp7g24080.v2.2, Sp7g27620.v2.2
Brassicaceae Brassica nigra 4 BniB02g035590.2N, BniB02g082260.2N, BniB05g007900.2N ...
BniB08g014430.2N
Casuarinaceae Casuarina equisetifolia 2 Ceq06G0825, Ceq06G1572
Casuarinaceae Casuarina glauca 2 Cgl06G0849, Cgl06G1631
Cymodoceaceae Cymodocea nodosa 2 gene.Cymno01g10150, gene.Cymno01g12740
Dunaliellaceae Dunaliella salina 1 Dusal.0024s00003.v1.0
Hydrocharitaceae Thalassia testudinum 2 gene.Thate02g01380, gene.Thate06g15760
Malvaceae Hibiscus hamabo Siebold & Zucc. 1 nbisL1-mrna-175
Nitrariaceae Nitraria sibirica 2 evm.TU.LG07.1168, evm.TU.LG07.1271
Plantaginaceae Plantago ovata 3 Pov_00003434, Pov_00004087, Pov_00039602
Plumbaginaceae Limonium bicolor 4 Lb0G37148, Lb3G16941, Lb7G34232, Lb7G34243
Poaceae Echinochloa crus-galli 5 AH02.3013, AH06.245, BH02.3104, CH02.3419, CH06.340
Poaceae Eleusine coracana subsp. coracana 6 gene-QOZ80_1AG0031520, gene-QOZ80_1BG0081640 ...
gene-QOZ80_5AG0407670, gene-QOZ80_5BG0456010, gene-QOZ80_6AG0508750, gene-QOZ80_6BG0460910
Poaceae Hordeum vulgare 2 HORVU.MOREX.r3.4HG0408170.1, HORVU.MOREX.r3.7HG0650300.1
Poaceae Lolium multiflorum 2 gene-QYE76_027869, gene-QYE76_070752
Poaceae Oryza coarctata 4 Oco01G011080, Oco11G002250, Oco12G002240, Oco21G003470
Poaceae Oryza sativa 2 LOC_Os01g32660.1, LOC_Os06g05520.1
Poaceae Paspalum vaginatum 5 gene-BS78_03G260300, gene-BS78_09G016300, gene-BS78_K316300 ...
gene-BS78_10G041300, gene-BS78_10G041400
Poaceae Puccinellia tenuiflora 3 Pt_Chr0402217, Pt_Chr0601959, Pt_Chr0604121
Poaceae Sporobolus alterniflorus 11 Chr01G013590, Chr02G010900, Chr05G022710, Chr0G015680 ...
Chr0G030890, Chr11G022990, Chr12G023200, Chr14G001750, Chr18G002500, Chr21G000870, Chr22G016430
Poaceae Thinopyrum elongatum 3 Tel4E01G521200, Tel6E01G175000, Tel7E01G199500
Poaceae Triticum dicoccoides 5 gene_TRIDC4AG055280, gene_TRIDC4AG057520 ...
gene_TRIDC4BG053280, gene_TRIDC6BG013790, gene_TRIDC7AG011400
Poaceae Triticum aestivum 6 TraesCS4A02G396700.2, TraesCS4A02G414600.1 ...
TraesCS4B02G315300.1, TraesCS4D02G312300.3, TraesCS7A02G096800.1, TraesCS7D02G092900.1
Poaceae Zea mays 2 Zm00001eb154530_P002, Zm00001eb377050_P001
Poaceae Zoysia japonica 2 nbis-gene-18350, nbis-gene-26330
Poaceae Zoysia macrostachya 3 Zma_g11039, Zma_g27586, Zma_g31353
Portulacaceae Portulaca oleracea 6 evm.TU.LG02.2355, evm.TU.LG02.2787, evm.TU.LG05.1535 ...
evm.TU.LG07.1194, evm.TU.LG23.587, evm.TU.LG23.992
Posidoniaceae Posidonia oceanica 2 gene.Posoc03g19830, gene.Posoc03g23750
Rhizophoraceae Bruguiera sexangula 4 evm.TU.60383.2, evm.TU.60384.2 ...
evm.TU.Scaffold_4_RagTag.1810, evm.TU.Scaffold_4_RagTag.1888
Rhizophoraceae Carallia pectinifolia 2 nbisL1-mrna-25697, nbisL1-mrna-25765
Rhizophoraceae Ceriops tagal 3 nbisL1-mrna-12788, nbisL1-mrna-19076, nbisL1-mrna-20187
Rhizophoraceae Ceriops zippeliana 3 nbisL1-mrna-16930, nbisL1-mrna-4606, nbisL1-mrna-4664
Rhizophoraceae Kandelia candel 3 evm.TU.utg000008l.1022, evm.TU.utg000008l.1076 ...
evm.TU.utg000033l.379
Rhizophoraceae Kandelia obovata 3 Maker00000139, Maker00001006, Maker00014709
Rhizophoraceae Rhizophora apiculata 3 nbisL1-mrna-14806, nbisL1-mrna-14862, nbisL1-mrna-4003
Rhizophoraceae Rhizophora mangle 3 nbisL1-mrna-1108, nbisL1-mrna-1175, nbisL1-mrna-8163
Salicaceae Populus euphratica 5 populus_peu05006, populus_peu05071, populus_peu05072 ...
populus_peu11892, populus_peu11904
Solanaceae Lycium barbarum 3 gene-LOC132633142, gene-LOC132633281, gene-LOC132636897
Solanaceae Solanum chilense 2 SOLCI000531800, SOLCI004334900
Solanaceae Solanum pennellii 2 gene-LOC107007412, gene-LOC107012802
Tamaricaceae Reaumuria soongarica 2 STRG.17970_chr09_-, gene_8038
Tamaricaceae Tamarix chinensis 2 TC10G1509, TC10G1808
Zosteraceae Zostera marina 2 Zosma05g24860.v3.1, Zosma06g00660.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.