Basic Information
Locus ID:
Sgl42695
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Membrane-associated apoptosis protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 8707045 | 8711246 | - | Sgl42695 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.14 | 34,793.09 Da | 42.17 | 89.97 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF09735 | Membrane-associated apoptosis protein | 4 | 87 | 2.1E-18 | IPR019137 |
| Pfam | PF01388 | ARID/BRIGHT DNA binding domain | 105 | 187 | 1.4E-11 | IPR001606 |
| SUPERFAMILY | SSF46774 | ARID-like | 103 | 191 | 7.72E-17 | IPR036431 |
| Gene3D | G3DSA:1.10.150.60 | - | 87 | 196 | 2.2E-17 | IPR036431 |
| SMART | SM00501 | bright_3 | 94 | 192 | 4.1E-4 | IPR001606 |
| SMART | SM01014 | ARID_2 | 90 | 187 | 4.8E-12 | - |
| ProSiteProfiles | PS51011 | ARID domain profile. | 77 | 191 | 16.209919 | IPR001606 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35110.2 | transcription activators. Component of the WAVE protein complex which act as activators of ARP2/3 complex involved in actin nucleation. Required for trichome morphogenesis. Mutant displays distorted trichomes, a phenotype that can be phenocopied by treatment of WT plants with actin-interacting drugs. | 0 |
| RefSeq | XP_021837956.1 | high mobility group B protein 15-like isoform X2 [Spinacia oleracea] | 0 |
| Q5S2C4 | Protein NAP1 OS=Arabidopsis thaliana OX=3702 GN=NAP1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9RKE8 | High mobility group B protein 15-like OS=Spinacia oleracea OX=3562 GN=SOVF_061930 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology