Basic Information
Locus ID:
Sgl42687
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 8639176 | 8643222 | - | Sgl42687 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 88,715.74 Da | 43.70 | 82.91 | -0.33 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17300 | PIPKc_PIKfyve | 331 | 594 | 4.63918E-153 | IPR044769 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 708 | 764 | 1.3E-7 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 370 | 536 | 4.6E-33 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 537 | 592 | 1.4E-7 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 606 | 766 | 1.05E-38 | - |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 311 | 594 | 7.19E-81 | - |
| Gene3D | G3DSA:3.30.810.10 | - | 709 | 765 | 9.1E-12 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 599 | 661 | 5.8E-8 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 662 | 708 | 1.2E-9 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 307 | 451 | 4.8E-37 | IPR027484 |
| Gene3D | G3DSA:3.30.810.10 | - | 453 | 595 | 2.2E-42 | - |
| SMART | SM00330 | PIPK_2 | 598 | 767 | 1.1E-17 | IPR002498 |
| SMART | SM00330 | PIPK_2 | 304 | 595 | 7.9E-125 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 659 | 766 | 13.0656 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 275 | 594 | 57.400032 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 40 | 56 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 33 | 63 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 139 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010687592.2 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RAB9 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Spinacia oleracea OX=3562 GN=SOVF_088960 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology