Basic Information
Locus ID:
Sgl42231
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
proteinaceous RNase P 1, chloroplastic mitochondrial-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 5028383 | 5031835 | - | Sgl42231 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.99 | 97,351.46 Da | 42.95 | 65.40 | -0.73 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF16953 | Protein-only RNase P | 542 | 766 | 6.2E-73 | IPR031595 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 353 | 499 | 8.7E-55 | IPR033443 |
| Pfam | PF17177 | Pentacotripeptide-repeat region of PRORP | 229 | 288 | 1.8E-16 | IPR033443 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 350 | 769 | 4.7E-197 | IPR011990 |
| Gene3D | G3DSA:3.40.50.11980 | - | 558 | 732 | 4.7E-197 | - |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 412 | 446 | 8.823904 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 815 | 843 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 843 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 292 | 344 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 144 | 179 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 297 | 311 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 128 | 237 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 314 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 776 | 800 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 223 | - | - |
| Coils | Coil | Coil | 325 | 345 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G32230.1 | proteinaceous RNase P 1. RNase P able to cleave tRNA-like structures involved in the maturation of plant mitochondrial mRNAs. | 0 |
| RefSeq | XP_021862317.1 | proteinaceous RNase P 3-like isoform X1 [Spinacia oleracea] | 0 |
| Q66GI4 | Proteinaceous RNase P 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PRORP1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RZA4 | ribonuclease P OS=Spinacia oleracea OX=3562 GN=SOVF_011940 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology