Basic Information
Locus ID:
Sgl41934
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 2702454 | 2705482 | + | Sgl41934 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.91 | 88,215.99 Da | 41.82 | 84.58 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 515 | 778 | 3.4E-110 | IPR024283 |
| Pfam | PF04548 | AIG1 family | 171 | 330 | 4.7E-21 | IPR006703 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 164 | 296 | 3.04E-16 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 143 | 387 | 4.6E-50 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 67 | 778 | 8.5E-200 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 167 | 398 | 26.289143 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 509 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 89 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_010687870.1 | translocase of chloroplast 90, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QP45 | AIG1-type G domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_157510 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology