Basic Information
Locus ID:
Sgl41786
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the RecA family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 1619461 | 1624370 | + | Sgl41786 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.72 | 32,578.24 Da | 34.76 | 96.56 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00154 | recA bacterial DNA recombination protein | 78 | 203 | 1.2E-48 | IPR013765 |
| SUPERFAMILY | SSF54752 | RecA protein, C-terminal domain | 207 | 257 | 2.09E-7 | IPR023400 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 78 | 203 | 1.06E-15 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 78 | 266 | 9.5E-53 | IPR027417 |
| ProSiteProfiles | PS50163 | RecA family profile 2. | 137 | 208 | 25.545444 | IPR020587 |
| ProSitePatterns | PS00321 | recA signature. | 149 | 157 | - | IPR020584 |
| PRINTS | PR00142 | RecA protein signature | 99 | 128 | 1.2E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 61 | 90 | 1.2E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 232 | 249 | 1.2E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 146 | 174 | 1.2E-46 | IPR013765 |
| PRINTS | PR00142 | RecA protein signature | 179 | 208 | 1.2E-46 | IPR013765 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 268 | 299 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G19490.1 | recA DNA recombination family protein. | 0 |
| RefSeq | XP_019102720.1 | DNA repair protein recA homolog 3, mitochondrial isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9ZUP2 | DNA repair protein recA homolog 3, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At2g19490 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C8ZFQ8 | DNA repair protein recA homolog 3, mitochondrial OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology