Basic Information
Locus ID:
Sgl41705
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
breast cancer carboxy-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 999986 | 1000537 | + | Sgl41705 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.05 | 20,922.99 Da | 40.88 | 72.30 | -0.52 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12678 | RING-H2 zinc finger domain | 118 | 176 | 5.7E-11 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 85 | 179 | 2.22E-14 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 92 | 182 | 1.4E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 120 | 175 | 4.1E-5 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 120 | 176 | 12.577796 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 36 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G37230.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_028785817.1 | E3 ubiquitin-protein ligase SIRP1-like [Prosopis alba] | 0 |
| TrEMBL | A0A0J8B9I3 | RING-type domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 GN=BVRB_5g125750 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||