Basic Information
Locus ID:
Sgl41658
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 673196 | 677232 | + | Sgl41658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 64,291.02 Da | 38.18 | 83.67 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 357 | 440 | 4.5E-15 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 150 | 247 | 7.6E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 38 | 127 | 6.4E-14 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 548 | 1.23E-32 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 143 | 251 | 1.3E-15 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 429 | 539 | 2.4E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 315 | 428 | 2.8E-38 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 27 | 130 | 2.5E-18 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 27 | 130 | 16.05435 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 139 | 251 | 14.949993 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 355 | 577 | 13.658404 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 361 | 383 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021726272.1 | putative receptor-like protein kinase At4g00960 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LKZ1 | Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 3 | Sgl41623, Sgl41658, Sgl46419 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0003140 |