Basic Information
Locus ID:
Sgl41623
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA5 | 471872 | 476902 | + | Sgl41623 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.63 | 73,273.25 Da | 41.60 | 83.57 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 8 | 82 | 1.9E-6 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 122 | 211 | 3.8E-15 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 441 | 524 | 5.4E-15 | IPR001245 |
| Pfam | PF01657 | Salt stress response/antifungal | 234 | 331 | 5.9E-7 | IPR002902 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 427 | 621 | 8.11E-32 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 111 | 214 | 1.6E-19 | IPR038408 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 399 | 513 | 3.5E-38 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 227 | 335 | 1.5E-15 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 3 | 86 | 1.9E-14 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 514 | 622 | 6.9E-14 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 439 | 664 | 13.347456 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 111 | 214 | 16.624632 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 223 | 335 | 15.058619 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 1 | 86 | 13.800377 | IPR002902 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 445 | 467 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G05200.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 25. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021726272.1 | putative receptor-like protein kinase At4g00960 [Chenopodium quinoa] | 0 |
| Q9M0X5 | Cysteine-rich receptor-like protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CRK25 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LKZ1 | Cysteine-rich receptor-like protein kinase 10 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Suaeda glauca | 3 | Sgl41623, Sgl41658, Sgl46419 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0003140 |