Basic Information
Locus ID:
Sgl41030
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 57473016 | 57479053 | + | Sgl41030 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.96 | 36,172.37 Da | 56.00 | 68.31 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 65 | 328 | 8.4E-82 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 222 | 318 | 8.34E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 218 | 331 | 9.1E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 224 | 321 | 27.247524 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 25 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_021747561.1 | auxin-responsive protein IAA9-like [Chenopodium quinoa] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R4K3I3 | Auxin-responsive protein OS=Bassia scoparia OX=83154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology