Basic Information
Locus ID:
Sgl40768
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 55060854 | 55062179 | + | Sgl40768 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.22 | 47,443.27 Da | 45.81 | 85.74 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 99 | 438 | 2.12005E-75 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 298 | 434 | 5.9E-21 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 99 | 276 | 4.0E-53 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 94 | 438 | 1.95E-86 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 77 | 275 | 4.8E-51 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 276 | 441 | 1.1E-37 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 99 | 434 | 45.513062 | IPR033121 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 20 | 5.0 | - |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 114 | 125 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 318 | 329 | 2.7E-6 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 105 | 125 | 2.7E-6 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_010682593.2 | aspartic proteinase CDR1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJE5 | Peptidase A1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_178820 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology