HalophFGD

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Basic Information
Locus ID: Sgl40731
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: Mitochondrial protein
Maps and Mapping Data
Chromosome Start End Strand ID
chrB4 54786884 54787504 - Sgl40731
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.69 22,604.84 Da 35.96 54.95 -0.58
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021734056.1 uncharacterized protein LOC110700765 [Chenopodium quinoa] 0
TrEMBL A0A2Z6P4P5 Reverse transcriptase Ty1/copia-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_141000 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 26 Sbi_jg16622, Sbi_jg17073, Sbi_jg19473, Sbi_jg22216 ...
Sbi_jg22891, Sbi_jg23686, Sbi_jg23825, Sbi_jg27443, Sbi_jg28868, Sbi_jg3161, Sbi_jg38181, Sbi_jg4031, Sbi_jg40593, Sbi_jg425, Sbi_jg46308, Sbi_jg46391, Sbi_jg46665, Sbi_jg50507, Sbi_jg5171, Sbi_jg52198, Sbi_jg53458, Sbi_jg57546, Sbi_jg57609, Sbi_jg57842, Sbi_jg63673, Sbi_jg7635
Amaranthaceae Salicornia europaea 3 Seu_jg16625, Seu_jg25299, Seu_jg7424
Amaranthaceae Suaeda glauca 2 Sgl03630, Sgl40731
Amaranthaceae Chenopodium album 3 gene:ENSEOMG00000000054, gene:ENSEOMG00000012600 ...
gene:ENSEOMG00000042438
Anacardiaceae Pistacia vera 2 pistato.v30279440, pistato.v30295370
Asparagaceae Asparagus officinalis 2 AsparagusV1_05.1654.V1.1, AsparagusV1_07.3416.V1.1
Asteraceae Flaveria trinervia 5 Ftri13G30324, Ftri17G32806, Ftri18G17640, Ftri2G04800 ...
Ftri5G25740
Brassicaceae Schrenkiella parvula 3 Sp1g31710.v2.2, Sp3g30840.v2.2, Sp6g11040.v2.2
Brassicaceae Brassica nigra 6 BniB03g012420.2N, BniB03g019180.2N, BniB03p000127.2N ...
BniB05g060060.2N, BniB07g021730.2N, BniB08g051100.2N
Cymodoceaceae Cymodocea nodosa 1 gene.Cymno07g04970
Hydrocharitaceae Thalassia testudinum 6 gene.Thate01g10940, gene.Thate01g12370, gene.Thate01g15600 ...
gene.Thate02g14470, gene.Thate04g12570, gene.Thate04g23010
Plantaginaceae Plantago ovata 2 Pov_00011159, Pov_00035385
Plumbaginaceae Limonium bicolor 7 Lb1G00354, Lb1G04269, Lb1G05332, Lb3G19102, Lb4G26327 ...
Lb6G30763, Lb7G34631
Poaceae Lolium multiflorum 8 gene-QYE76_003245, gene-QYE76_007001, gene-QYE76_013642 ...
gene-QYE76_024406, gene-QYE76_035339, gene-QYE76_040688, gene-QYE76_071047, gene-QYE76_071738
Poaceae Oryza coarctata 7 Oco02G019040, Oco02G023470, Oco12G002390, Oco14G006220 ...
Oco16G004580, Oco23G002320, Oco24G006180
Poaceae Sporobolus alterniflorus 3 Chr03G009110, Chr05G026030, Chr21G013920
Poaceae Zoysia japonica 5 nbis-gene-20349, nbis-gene-26712, nbis-gene-40161 ...
nbis-gene-42276, nbis-gene-52015
Posidoniaceae Posidonia oceanica 44 gene.Posoc01g13060, gene.Posoc01g13470, gene.Posoc01g17170 ...
gene.Posoc01g19610, gene.Posoc01g19890, gene.Posoc01g30520, gene.Posoc02g03670, gene.Posoc02g07870, gene.Posoc02g12200, gene.Posoc02g21640, gene.Posoc02g23720, gene.Posoc02g24020, gene.Posoc02g29000, gene.Posoc03g11580, gene.Posoc03g24400, gene.Posoc03g27140, gene.Posoc04g00740, gene.Posoc04g16630, gene.Posoc04g17200, gene.Posoc04g22090, gene.Posoc04g22120, gene.Posoc04g22140, gene.Posoc04g22170, gene.Posoc04g22200, gene.Posoc04g22210, gene.Posoc04g22240, gene.Posoc04g22320, gene.Posoc04g22340, gene.Posoc04g22350, gene.Posoc05g04040, gene.Posoc05g06180, gene.Posoc05g13900, gene.Posoc05g20610, gene.Posoc06g02030, gene.Posoc06g02880, gene.Posoc06g09130, gene.Posoc06g15880, gene.Posoc06g18800, gene.Posoc06g20520, gene.Posoc06g22270, gene.Posoc07g00420, gene.Posoc08g00970, gene.Posoc08g07810, gene.Posoc09g12000
Rhizophoraceae Carallia pectinifolia 1 nbisL1-mrna-15111
Salicaceae Populus euphratica 2 populus_peu11926, populus_peu14117
Tamaricaceae Reaumuria soongarica 2 STRG.21414_chr09_-, gene_5043
Zosteraceae Zostera marina 11 Zosma01g01490.v3.1, Zosma01g09590.v3.1, Zosma01g11890.v3.1 ...
Zosma01g13250.v3.1, Zosma02g01960.v3.1, Zosma03g16350.v3.1, Zosma04g13440.v3.1, Zosma04g14270.v3.1, Zosma05g00490.v3.1, Zosma06g30640.v3.1, Zosma23g00050.v3.1
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.