Basic Information
Locus ID:
Sgl40507
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 53162822 | 53166197 | + | Sgl40507 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 69,808.34 Da | 40.03 | 86.90 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 43 | 134 | 1.1E-15 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 167 | 248 | 2.4E-7 | IPR002902 |
| Pfam | PF00069 | Protein kinase domain | 310 | 553 | 7.6E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 307 | 559 | 3.24E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.430.20 | - | 152 | 251 | 5.3E-12 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 367 | 574 | 4.3E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 305 | 366 | 5.2E-18 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 136 | 8.1E-18 | IPR038408 |
| SMART | SM00220 | serkin_6 | 285 | 554 | 1.6E-17 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 147 | 251 | 12.225311 | IPR002902 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 33 | 137 | 15.846151 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 251 | 562 | 30.74641 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 406 | 418 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24540.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010682481.2 | proline-rich receptor-like protein kinase PERK15 [Beta vulgaris subsp. vulgaris] | 0 |
| Q1PEM5 | Proline-rich receptor-like protein kinase PERK3 OS=Arabidopsis thaliana OX=3702 GN=PERK3 PE=2 SV=2 | 0 | |
| TrEMBL | A0A0K9R1P5 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_117030 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 2 | gene_18060, gene_18061 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah013809 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_6g147530 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg45383 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg11246 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00002550 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl35133, Sgl40507 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG13.116 |