Basic Information
Locus ID:
Sgl40229
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
RHB1A
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 50933734 | 50935290 | + | Sgl40229 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 26,287.97 Da | 47.14 | 77.37 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12678 | RING-H2 zinc finger domain | 165 | 209 | 5.1E-11 | IPR024766 |
| SUPERFAMILY | SSF57850 | RING/U-box | 155 | 216 | 1.57E-17 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 164 | 217 | 4.4E-14 | IPR013083 |
| SMART | SM00184 | ring_2 | 169 | 209 | 2.8E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 169 | 209 | 11.869652 | IPR001841 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G02290.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_020250374.1 | E3 ubiquitin-protein ligase At3g02290-like [Asparagus officinalis] | 0 |
| Q8LE94 | E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana OX=3702 GN=At3g02290 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0S3RRJ6 | RING-type domain-containing protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.04G033200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for Sgl40229.