Basic Information
Locus ID:
Sgl39713
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 46850324 | 46853323 | + | Sgl39713 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.59 | 40,998.54 Da | 40.25 | 113.09 | 0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 1 | 350 | 2.11166E-39 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 2 | 311 | 5.7E-22 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 2 | 357 | 2.22E-33 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 1 | 352 | 1.5E-33 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 357 | 12.206946 | IPR020846 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_021755148.1 | hippocampus abundant transcript-like protein 1 [Chenopodium quinoa] | 0 |
| P51563 | Tetracycline resistance protein, class G OS=Vibrio anguillarum OX=55601 GN=tetA PE=3 SV=1 | 0 | |
| TrEMBL | A0A803KV97 | MFS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology