Basic Information
Locus ID:
Sgl39711
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Hippocampus abundant transcript-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 46805517 | 46814315 | + | Sgl39711 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 49,244.41 Da | 44.76 | 113.24 | 0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd17330 | MFS_SLC46_TetA_like | 25 | 420 | 2.1943E-58 | - |
| Pfam | PF07690 | Major Facilitator Superfamily | 59 | 381 | 4.2E-22 | IPR011701 |
| SUPERFAMILY | SSF103473 | MFS general substrate transporter | 60 | 428 | 1.29E-37 | IPR036259 |
| Gene3D | G3DSA:1.20.1250.20 | MFS general substrate transporter like domains | 32 | 423 | 3.4E-35 | IPR036259 |
| ProSiteProfiles | PS50850 | Major facilitator superfamily (MFS) profile. | 1 | 427 | 10.420426 | IPR020846 |
| ProSitePatterns | PS00216 | Sugar transport proteins signature 1. | 77 | 93 | - | IPR005829 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G42210.1 | Major facilitator superfamily protein. | 0 |
| RefSeq | XP_010681370.2 | hippocampus abundant transcript-like protein 1 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | A0A803KV97 | MFS domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology