Basic Information
Locus ID:
Sgl39692
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
SEC12-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 46570993 | 46576340 | + | Sgl39692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.79 | 34,169.45 Da | 32.99 | 87.33 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 88 | 185 | 2.3E-4 | IPR024977 |
| SUPERFAMILY | SSF50129 | GroES-like | 274 | 311 | 1.11E-8 | IPR011032 |
| SUPERFAMILY | SSF47473 | EF-hand | 4 | 87 | 4.86E-6 | IPR011992 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 86 | 259 | 6.96E-21 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 85 | 262 | 2.1E-31 | IPR015943 |
| Gene3D | G3DSA:3.90.180.10 | - | 276 | 311 | 1.1E-9 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01470.1 | SEC12P-like 2 protein. Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. | 0 |
| RefSeq | XP_021755153.1 | SEC12-like protein 2 [Chenopodium quinoa] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A803M4G0 | ANAPC4_WD40 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology