Basic Information
Locus ID:
Sgl38844
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 40418524 | 40420330 | - | Sgl38844 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.29 | 46,044.07 Da | 40.88 | 107.78 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 261 | 280 | 1.3 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 41 | 81 | 1.2E-5 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 166 | 225 | 6.1E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 407 | 2.47E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 211 | 1.3E-33 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 212 | 408 | 1.0E-28 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 140 | 163 | 88.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 259 | 283 | 8.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 189 | 212 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 164 | 188 | 17.0 | IPR003591 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_021859954.1 | DNA damage-repair/toleration protein DRT100 [Spinacia oleracea] | 0 |
| TrEMBL | A0A0K9S068 | LRRNT_2 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_014320 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology