Basic Information
Locus ID:
Sgl38658
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Lysosomal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 39246357 | 39255443 | + | Sgl38658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 120,741.63 Da | 39.92 | 79.74 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10810 | GH38N_AMII_LAM_like | 40 | 317 | 9.47589E-167 | - |
| Pfam | PF17677 | Glycosyl hydrolases family 38 C-terminal beta sandwich domain | 954 | 1064 | 2.0E-12 | IPR041147 |
| Pfam | PF01074 | Glycosyl hydrolases family 38 N-terminal domain | 41 | 353 | 2.2E-91 | IPR000602 |
| Pfam | PF07748 | Glycosyl hydrolases family 38 C-terminal domain | 620 | 826 | 3.7E-48 | IPR011682 |
| Pfam | PF09261 | Alpha mannosidase middle domain | 358 | 450 | 5.3E-20 | IPR015341 |
| SUPERFAMILY | SSF74650 | Galactose mutarotase-like | 466 | 1067 | 2.09E-108 | IPR011013 |
| SUPERFAMILY | SSF88713 | Glycoside hydrolase/deacetylase | 29 | 355 | 1.5E-109 | IPR011330 |
| SUPERFAMILY | SSF88688 | Families 57/38 glycoside transferase middle domain | 358 | 458 | 5.89E-27 | IPR028995 |
| Gene3D | G3DSA:2.70.98.30 | - | 860 | 919 | 7.0E-7 | - |
| Gene3D | G3DSA:2.70.98.30 | - | 617 | 834 | 4.0E-78 | - |
| Gene3D | G3DSA:3.20.110.10 | Glycoside hydrolase 38, N terminal domain | 40 | 321 | 4.9E-117 | IPR027291 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 400 | 457 | 2.1E-20 | IPR037094 |
| Gene3D | G3DSA:1.20.1270.50 | Glycoside hydrolase family 38, central domain | 322 | 399 | 4.4E-30 | IPR037094 |
| Gene3D | G3DSA:2.60.40.1180 | - | 468 | 595 | 1.2E-18 | IPR013780 |
| Gene3D | G3DSA:2.60.40.1360 | - | 941 | 1067 | 4.1E-35 | - |
| SMART | SM00872 | Alpha_mann_mid_2 | 358 | 432 | 1.9E-20 | IPR015341 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66150.2 | - | 0 |
| RefSeq | XP_010679911.2 | alpha-mannosidase isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9FKW9 | Probable alpha-mannosidase At5g66150 OS=Arabidopsis thaliana OX=3702 GN=At5g66150 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0K9QHW5 | Alpha-mannosidase OS=Spinacia oleracea OX=3562 GN=SOVF_177470 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology