halophFGD

Basic Information

Locus ID: Sgl38521

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: F-box protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB4	38399216	38400418	+	Sgl38521

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.33	46,095.56 Da	40.73	99.38	0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
SUPERFAMILY	SSF81383	F-box domain	15	85	4.19E-7	IPR036047
TIGRFAM	TIGR01640	F_box_assoc_1: F-box protein interaction domain	138	323	7.3E-23	IPR017451

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT4G12560.1	F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response.	0
RefSeq	XP_021846574.1	F-box protein At4g22390-like [Spinacia oleracea]	0
Swiss-Prot	Q9SU30	F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2	0
TrEMBL	A0A0K9RVP1	F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_022090 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Amaranthaceae	Atriplex hortensis	13	Ah001920, Ah003798, Ah004407, Ah004408, Ah004409, Ah008157 ... Ah010458, Ah010828, Ah010831, Ah022482, Ah032943, Ah038021, Ah038025
Amaranthaceae	Beta vulgaris	2	BVRB_9g204180, BVRB_9g219200
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg17163, Sbi_jg27532, Sbi_jg52462, Sbi_jg61771
Amaranthaceae	Salicornia europaea	3	Seu_jg20871, Seu_jg423, Seu_jg7781
Amaranthaceae	Suaeda aralocaspica	11	GOSA_00000873, GOSA_00000881, GOSA_00011522, GOSA_00011523 ... GOSA_00013418, GOSA_00015200, GOSA_00015210, GOSA_00017501, GOSA_00019733, GOSA_00019734, GOSA_00019739
Amaranthaceae	Suaeda glauca	22	Sgl11782, Sgl17271, Sgl24939, Sgl30083, Sgl33301, Sgl38521 ... Sgl38541, Sgl38559, Sgl45548, Sgl45549, Sgl45550, Sgl45552, Sgl50333, Sgl50335, Sgl50336, Sgl78539, Sgl78553, Sgl78621, Sgl78622, Sgl81029, Sgl81099, Sgl81100
Amaranthaceae	Chenopodium album	10	gene:ENSEOMG00000016276, gene:ENSEOMG00000021311 ... gene:ENSEOMG00000025450, gene:ENSEOMG00000032638, gene:ENSEOMG00000035631, gene:ENSEOMG00000037957, gene:ENSEOMG00000038425, gene:ENSEOMG00000039745, gene:ENSEOMG00000051485, gene:ENSEOMG00000051554
Amaranthaceae	Chenopodium quinoa	15	CQ.Regalona.r1.3BG0025960, CQ.Regalona.r1.3BG0025970 ... CQ.Regalona.r1.4AG0010490, CQ.Regalona.r1.4BG0020100, CQ.Regalona.r1.4BG0020110, CQ.Regalona.r1.5AG0016500, CQ.Regalona.r1.5AG0016510, CQ.Regalona.r1.5BG0001640, CQ.Regalona.r1.5BG0017780, CQ.Regalona.r1.5BG0020740, CQ.Regalona.r1.7BG0009400, CQ.Regalona.r1.7BG0009410, CQ.Regalona.r1.9AG0013250, CQ.Regalona.r1.9AG0015130, CQ.Regalona.r1.9AG0015140
Poaceae	Lolium multiflorum	1	gene-QYE76_057782