halophFGD

Basic Information

Locus ID: Sgl38164

Species & Taxonomic ID: Suaeda glauca & 397272

Genome Assembly: GWHEQCX00000000

Description: Zinc finger BED domain-containing protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chrB4	34442827	34444419	-	Sgl38164

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
5.70	44,811.39 Da	30.31	78.95	-0.33

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF14372	Domain of unknown function (DUF4413)	160	261	4.4E-29	IPR025525
Pfam	PF05699	hAT family C-terminal dimerisation region	311	390	7.4E-25	IPR008906
SUPERFAMILY	SSF53098	Ribonuclease H-like	30	390	2.96E-64	IPR012337

Gene Ontology

Molecular Function:

GO:0003677 (DNA binding) GO:0046983 (protein dimerization activity)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G42170.2	-
RefSeq	XP_048496295.1	zinc finger BED domain-containing protein RICESLEEPER 2-like [Beta vulgaris subsp. vulgaris]
Swiss-Prot	P08770	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2
TrEMBL	A0A803MF79	BED-type domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Aizoaceae	Mesembryanthemum crystallinum	4	gene_18523, gene_18908, gene_24739, gene_757
Amaranthaceae	Atriplex hortensis	4	Ah002403, Ah025340, Ah025341, Ah035896
Amaranthaceae	Beta vulgaris	2	BVRB_6g136250, BVRB_7g170450
Amaranthaceae	Salicornia bigelovii	7	Sbi_jg16564, Sbi_jg23483, Sbi_jg33887, Sbi_jg40651 ... Sbi_jg44127, Sbi_jg54724, Sbi_jg54933
Amaranthaceae	Salicornia europaea	2	Seu_jg14931, Seu_jg27982
Amaranthaceae	Suaeda glauca	8	Sgl18348, Sgl25401, Sgl30582, Sgl30712, Sgl32903, Sgl38164 ... Sgl71565, Sgl75141
Amaranthaceae	Chenopodium album	2	gene:ENSEOMG00000006175, gene:ENSEOMG00000019503
Amaranthaceae	Chenopodium quinoa	30	CQ.Regalona.r1.1AG0015170, CQ.Regalona.r1.1BG0000790 ... CQ.Regalona.r1.1BG0010630, CQ.Regalona.r1.2BG0017680, CQ.Regalona.r1.3BG0012350, CQ.Regalona.r1.3BG0025260, CQ.Regalona.r1.4AG0002990, CQ.Regalona.r1.4AG0017510, CQ.Regalona.r1.4BG0009700, CQ.Regalona.r1.5BG0003840, CQ.Regalona.r1.5BG0007100, CQ.Regalona.r1.5BG0009510, CQ.Regalona.r1.5BG0021230, CQ.Regalona.r1.6AG0002420, CQ.Regalona.r1.6AG0013410, CQ.Regalona.r1.6BG0009300, CQ.Regalona.r1.6BG0012470, CQ.Regalona.r1.7AG0015360, CQ.Regalona.r1.7AG0022350, CQ.Regalona.r1.7BG0004970, CQ.Regalona.r1.7BG0014980, CQ.Regalona.r1.7BG0016010, CQ.Regalona.r1.7BG0022020, CQ.Regalona.r1.8AG0009920, CQ.Regalona.r1.8AG0016460, CQ.Regalona.r1.8AG0016530, CQ.Regalona.r1.8BG0005720, CQ.Regalona.r1.8BG0024410, CQ.Regalona.r1.9BG0012560, CQ.Regalona.r1.9BG0013640
Plantaginaceae	Plantago ovata	1	Pov_00009065
Plumbaginaceae	Limonium bicolor	1	Lb3G16891
Zosteraceae	Zostera marina	2	Zosma04g10920.v3.1, Zosma04g21000.v3.1