Basic Information
Locus ID:
Sgl37663
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 24687224 | 24691611 | + | Sgl37663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.87 | 97,445.29 Da | 40.01 | 87.92 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 556 | 829 | 5.65016E-94 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 299 | 337 | 0.25 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 360 | 400 | 2.1E-6 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 554 | 820 | 5.5E-47 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 9 | 40 | 7.4E-5 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 533 | 826 | 9.72E-78 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 17 | 411 | 1.28E-46 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 512 | 627 | 2.2E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2 | 298 | 1.2E-68 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 300 | 425 | 4.3E-29 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 628 | 851 | 2.3E-56 | - |
| SMART | SM00369 | LRR_typ_2 | 89 | 112 | 2.5 | IPR003591 |
| SMART | SM00220 | serkin_6 | 550 | 830 | 2.5E-41 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 113 | 139 | 380.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 163 | 186 | 390.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 209 | 232 | 52.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 363 | 386 | 14.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 550 | 830 | 40.92289 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 556 | 578 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 675 | 687 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 430 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 425 | 449 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010673522.1 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803KLX7 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology