Basic Information
Locus ID:
Sgl36485
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
ribonuclease H protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrB4 | 4036879 | 4042656 | + | Sgl36485 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 103,266.44 Da | 47.00 | 79.61 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14392 | Zinc knuckle | 173 | 218 | 3.6E-14 | IPR025836 |
| Pfam | PF14111 | Domain of unknown function (DUF4283) | 29 | 169 | 2.9E-24 | IPR025558 |
| SUPERFAMILY | SSF56219 | DNase I-like | 401 | 614 | 6.02E-28 | IPR036691 |
| Gene3D | G3DSA:3.60.10.10 | Endonuclease/exonuclease/phosphatase | 392 | 615 | 4.0E-28 | IPR036691 |
| ProSiteProfiles | PS50158 | Zinc finger CCHC-type profile. | 204 | 217 | 9.092303 | IPR001878 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 266 | 306 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 363 | 390 | - | - |
| Coils | Coil | Coil | 677 | 697 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048496559.1 | uncharacterized protein LOC125495778 [Beta vulgaris subsp. vulgaris] | 0 |
| TrEMBL | F4NCJ4 | Reverse transcriptase domain-containing protein OS=Beta vulgaris subsp. vulgaris OX=3555 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||