Basic Information
Locus ID:
Sgl36194
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
B3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 64812747 | 64813808 | + | Sgl36194 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.83 | 26,312.07 Da | 42.65 | 73.61 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd10017 | B3_DNA | 25 | 119 | 1.39584E-8 | IPR003340 |
| SUPERFAMILY | SSF101936 | DNA-binding pseudobarrel domain | 26 | 119 | 3.73E-14 | IPR015300 |
| SUPERFAMILY | SSF68906 | SAP domain | 173 | 208 | 2.01E-5 | IPR036361 |
| Gene3D | G3DSA:1.10.720.30 | SAP domain | 160 | 217 | 2.8E-6 | IPR036361 |
| Gene3D | G3DSA:2.40.330.10 | - | 20 | 121 | 1.5E-14 | IPR015300 |
| SMART | SM01019 | B3_2 | 27 | 121 | 0.0018 | IPR003340 |
| ProSiteProfiles | PS50863 | B3 DNA-binding domain profile. | 28 | 121 | 8.93818 | IPR003340 |
| ProSiteProfiles | PS50800 | SAP motif profile. | 175 | 209 | 8.667702 | IPR003034 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_030496774.1 | B3 domain-containing transcription factor VRN1 isoform X2 [Cannabis sativa] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||