HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Sgl36183
Species & Taxonomic ID: Suaeda glauca & 397272
Genome Assembly: GWHEQCX00000000
Description: B3 domain-containing
Maps and Mapping Data
Chromosome Start End Strand ID
chrA4 64608218 64608962 + Sgl36183
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.70 24,671.86 Da 31.99 70.38 -0.53
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF68906 SAP domain 171 205 6.96E-5 IPR036361
SUPERFAMILY SSF101936 DNA-binding pseudobarrel domain 37 116 4.32E-10 IPR015300
Gene3D G3DSA:2.40.330.10 - 24 118 1.3E-10 IPR015300
Gene3D G3DSA:1.10.720.30 SAP domain 159 211 5.9E-6 IPR036361
Best hit
Source Best Hit ID Description E-value
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Suaeda glauca 36 Sgl00131, Sgl04622, Sgl05193, Sgl09662, Sgl10673, Sgl12670 ...
Sgl12748, Sgl14916, Sgl15015, Sgl15244, Sgl17903, Sgl20151, Sgl21793, Sgl21925, Sgl30244, Sgl30269, Sgl30298, Sgl32478, Sgl33194, Sgl36159, Sgl36183, Sgl36194, Sgl36845, Sgl41473, Sgl46059, Sgl48535, Sgl50756, Sgl54536, Sgl57470, Sgl59401, Sgl59877, Sgl59940, Sgl65664, Sgl69976, Sgl75125, Sgl76935
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.