Basic Information
Locus ID:
Sgl35742
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 59266456 | 59268803 | - | Sgl35742 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.48 | 42,167.92 Da | 58.47 | 57.17 | -0.97 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 347 | 368 | 3.5E-7 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 173 | 229 | 1.2E-23 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 338 | 368 | 6.02E-10 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 170 | 231 | 6.41E-25 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 164 | 232 | 2.4E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 333 | 374 | 7.1E-16 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 346 | 375 | 1.5E-4 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 172 | 230 | 3.5E-32 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 173 | 231 | 24.041771 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 341 | 367 | 15.732135 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 274 | 329 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021747361.1 | probable WRKY transcription factor 3 [Chenopodium quinoa] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803L1X0 | WRKY transcription factor 3 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology