Basic Information
Locus ID:
Sgl35139
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Belongs to the short-chain dehydrogenases reductases (SDR) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 54255641 | 54259150 | + | Sgl35139 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.53 | 35,875.34 Da | 32.28 | 97.73 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05356 | 17beta-HSD1_like_SDR_c | 54 | 296 | 2.11995E-113 | - |
| Pfam | PF00106 | short chain dehydrogenase | 56 | 248 | 1.4E-40 | IPR002347 |
| SUPERFAMILY | SSF51735 | NAD(P)-binding Rossmann-fold domains | 54 | 255 | 1.76E-47 | IPR036291 |
| Gene3D | G3DSA:3.40.50.720 | - | 50 | 266 | 3.1E-49 | - |
| PIRSF | PIRSF000126 | 11-beta-HSD1 | 6 | 315 | 5.5E-99 | - |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | 187 | 195 | 4.7E-6 | IPR002347 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | 132 | 143 | 4.7E-6 | IPR002347 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | 56 | 73 | 4.2E-16 | IPR002347 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | 181 | 197 | 4.2E-16 | IPR002347 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | 209 | 228 | 4.2E-16 | IPR002347 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | 230 | 247 | 4.2E-16 | IPR002347 |
| PRINTS | PR00081 | Glucose/ribitol dehydrogenase family signature | 132 | 143 | 4.2E-16 | IPR002347 |
| PRINTS | PR00080 | Short-chain dehydrogenase/reductase (SDR) superfamily signature | 209 | 228 | 4.7E-6 | IPR002347 |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko00062 (Fatty acid elongation)
map00062 (Fatty acid elongation)
ko00140 (Steroid hormone biosynthesis)
map00140 (Steroid hormone biosynthesis)
ko01040 (Biosynthesis of unsaturated fatty acids)
map01040 (Biosynthesis of unsaturated fatty acids)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01212 (Fatty acid metabolism)
map01212 (Fatty acid metabolism)
Reaction:
R02352 (Estradiol-17beta + NAD+ <=> Estrone + NADH + H+)
R02353 (Estradiol-17beta + NADP+ <=> Estrone + NADPH + H+)
R04681 (Estriol + NAD+ <=> 16alpha-Hydroxyestrone + NADH + H+)
R04682 (Estriol + NADP+ <=> 16alpha-Hydroxyestrone + NADPH + H+)
R07759 (3-Oxostearoyl-CoA + NADPH + H+ <=> 3-Hydroxyoctadecanoyl-CoA + NADP+)
R08945 (11beta,17beta-Dihydroxy-4-androsten-3-one + NAD+ <=> 11beta-Hydroxyandrost-4-ene-3,17-dione + NADH + H+)
R08980 (11beta,17beta-Dihydroxy-4-androsten-3-one + NADP+ <=> 11beta-Hydroxyandrost-4-ene-3,17-dione + NADPH + H+)
R10826 (Very-long-chain (3R)-3-hydroxyacyl-CoA + NADP+ <=> Very-long-chain 3-oxoacyl-CoA + NADPH + H+)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67730.1 | beta-ketoacyl reductase 1. Encodes one of the two Arabidopsis homologues to YBR159w encoding a S. cerevisiae beta-ketoacyl reductase (KCR), which catalyzes the first reduction during VLCFA (very long chain fatty acids, >18 carbon) elongation: KCR1 (At1g67730), KCR2 (At1g24470). Complementation of the yeast ybr159Delta mutant demonstrated that the two KCR proteins are divergent and that only AtKCR1 can restore heterologous elongase activity similar to the native yeast KCR gene. | 0 |
| RefSeq | XP_021746726.1 | very-long-chain 3-oxoacyl-CoA reductase 1-like [Chenopodium quinoa] | 0 |
| Q8L9C4 | Very-long-chain 3-oxoacyl-CoA reductase 1 OS=Arabidopsis thaliana OX=3702 GN=KCR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M6X7 | Very-long-chain 3-oxoacyl-CoA reductase 1-like OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology