Basic Information
Locus ID:
Sgl34918
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Description:
Glutelin type-A
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 52698147 | 52700251 | + | Sgl34918 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 38,759.94 Da | 32.12 | 89.19 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02242 | cupin_11S_legumin_N | 3 | 173 | 1.08493E-67 | - |
| CDD | cd02243 | cupin_11S_legumin_C | 198 | 353 | 1.30371E-78 | - |
| Pfam | PF00190 | Cupin | 199 | 338 | 5.0E-24 | IPR006045 |
| Pfam | PF00190 | Cupin | 10 | 152 | 8.6E-28 | IPR006045 |
| SUPERFAMILY | SSF51182 | RmlC-like cupins | 16 | 345 | 1.51E-51 | IPR011051 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 195 | 356 | 6.6E-53 | IPR014710 |
| Gene3D | G3DSA:2.60.120.10 | Jelly Rolls | 4 | 194 | 5.8E-31 | IPR014710 |
| SMART | SM00835 | Cupin_1_3 | 195 | 339 | 9.2E-20 | IPR006045 |
| SMART | SM00835 | Cupin_1_3 | 3 | 157 | 3.3E-32 | IPR006045 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 294 | 312 | 7.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 276 | 291 | 7.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 316 | 333 | 7.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 211 | 231 | 7.8E-16 | IPR006044 |
| PRINTS | PR00439 | 11-S seed storage protein family signature | 258 | 274 | 7.8E-16 | IPR006044 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G28680.1 | RmlC-like cupins superfamily protein. | 0 |
| RefSeq | XP_021720934.1 | 11S globulin seed storage protein 2-like [Chenopodium quinoa] | 0 |
| P07728 | Glutelin type-A 1 OS=Oryza sativa subsp. japonica OX=39947 GN=GLUA1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R191 | 11S globulin OS=Spinacia oleracea OX=3562 GN=SOVF_118090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology