Basic Information
Locus ID:
Sgl34665
Species & Taxonomic ID:
Suaeda glauca & 397272
Genome Assembly:
GWHEQCX00000000
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chrA4 | 50835090 | 50837036 | + | Sgl34665 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.36 | 71,194.24 Da | 39.27 | 87.42 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00118 | LysM | 190 | 232 | 0.00156689 | IPR018392 |
| Pfam | PF01476 | LysM domain | 190 | 233 | 9.9E-6 | IPR018392 |
| Pfam | PF00069 | Protein kinase domain | 371 | 625 | 1.0E-37 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 339 | 627 | 1.54E-61 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 187 | 244 | 6.1E-7 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 336 | 426 | 1.9E-15 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 427 | 636 | 8.5E-50 | - |
| SMART | SM00220 | serkin_6 | 336 | 632 | 3.2E-21 | IPR000719 |
| SMART | SM00257 | LysM_2 | 188 | 233 | 2.5E-4 | IPR018392 |
| SMART | SM00257 | LysM_2 | 121 | 168 | 10.0 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 336 | 631 | 31.650986 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 187 | 232 | 11.50085 | IPR018392 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_010681194.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L839 | LysM domain receptor-like kinase 4 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology